基于多种生物学数据整合的基因调控网络重构研究

30700154
2007
C1005.生物成像、电子与探针
刘琪
青年科学基金项目
副教授
上海交通大学
20万元
最优网络;基因调控;数据整合
2008-01-01到2010-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 综合ChIP-chip数据、基因敲除数据和表达谱数据重构基因调控网络 期刊论文 李亦学|刘琪|江丽华|
2 InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes 会议论文 Shi, Tieliu|Ding, Guohui|Sun, Yan|Wang, Chuan|Sun, Jingchun|Zhao, Zhongming|He, Youyu|Liu, Qi|Li, Yixue|
3 TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information 期刊论文 刘琪|
4 Identifying cooperative transcription factors by combining ChIP-chip data and knockout data 期刊论文 Liu, Qi|Yang, Yi|Zhang, Zili|Li, Yixue|Zhu, Xin-Guang|
5 Reconstruction of Gene Regulatory Networks by Integrating ChIP-chip, Knock out and Expression Data 期刊论文 Li Yi-Xue|Jiang Li-Hua|Liu Qi|
6 Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data 期刊论文 Qi Liu|
7 Considering Dependencies Amongst Genes Helps to Adjust the Significance Rank of DEGs 期刊论文 Dai Hongyue|Huang Tao|Ding Guohui|Xie Lu|Li Yixue|Tan Yejun|Liu Qi|
8 Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain 会议论文 Liu, Qi|Liu, Zijing J.|Pan, Yuchun C.|Fu, Xing|Li, Jing|Cooper, Nigel G. F.|Shi, Tieliu|Li, Yixue|Qiu, Mengsheng|
9 Unraveling regulatory interactions by the integration of genome-wide location data and mutant data 会议论文 Deng, Yong|Liu, Qi|Jiang, Lihua|
10 A subjective methodology for risk quantification based on generalized fuzzy numbers 期刊论文 Yong, Deng|Qi, Liu|Jia, Xiong|
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