基于比较基因组学的方法搜索细菌外源基因池

30700013
2007
C0104.微生物遗传与生物合成
欧竑宇
青年科学基金项目
教授
上海交通大学
16万元
比较基因组分析;水平基因转移;基因组岛;细菌基因组多样性
2008-01-01到2010-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea 期刊论文 E. M. Harrison|Z. Deng|C. Tai|H. Y. Ou|Y. Shao|D. Bi|K. Rajakumar|X. He|
2 ATPase genes of diverse multidrug-resistant Acinetobacter baumannii isolates frequently harbour integrated DNA 期刊论文 Deng,Z.|Spence,R.P.|Rajakumar,K.|Levi,K.|Towner,K.J.|Shaikh,F.|Ou,H.-Y.|
3 mGenomeSubtractor: A web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes 期刊论文 C. Tai|H.Y. Ou|Y. Shao|E. Harrison|Z. Deng| K. Rajakumar |X. He|
4 Role and regulation of fatty acid biosynthesis in the response of Shewanella piezotolerans WP3 to different temperatures and pressures 期刊论文 Wang,F.|Xiao,X.|Wang,F.|Gai,Y.|Ou,H.-Y.|
5 利用酵母同源重组系统克隆肺炎克雷伯菌基因组岛 期刊论文 陈楠|欧竑宇|贾士儒|邓子新|张杰|蒋晓飞|贺新义|秦广雍|易梅|
6 The pheV phenylalanine tRNA gene in klebsiella pneumoniae clinical isolates is an integration hotspot for possible niche-adaptation genomic islands 期刊论文 Chen,X.|Ou,H.-Y.|Jiang,X.|Wei,Q.|Chen,N.|Li,M.|Lu,Y.|Yang,Z.|Van Aartsen,J.J.|Deng,Z.|He,X.|Rajakumar,K.|
7 Identification of Streptococcus gallolyticus subsp. macedonicus as the etiological agent in a case of culture-negative multivalve infective endocarditis by 16S rDNA PCR analysis of resected valvular tissue 期刊论文 M. Khare|N. Perera|P. S. Bhasker|Z. Deng|K. Rajakumar|I. Stephenson|J. Malkin|P. T. Kimmitt|A. W. Sosnowski|H. Y. Ou|
8 Expansion of the known Klebsiella pneumoniae species gene pool by characterization of novel alien DNA islands integrated into tmRNA gene sites 期刊论文 H.Y. Ou|X. Jiang|J. Zhang|S. Jia|Y. Shao|K. Rajakumar|J. Jurriaan van Aartsen|C. Tai|X. He|Z. Tan|Z. Deng|
9 sRNAscanner: A computational tool for intergenic small RNA detection in bacterial genomes 期刊论文 Rafi,Z.A.|Sridhar,J.|Sekar,K.|Deng,Z.|Narmada,S.R.|Ou,H.-Y.|Sabarinathan,R.|Rajakumar,K.|
10 Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14 期刊论文 Harrison,E.M.|Luck,S.|Carter,M.E.K.|He,X.|Deng,Z.|Rajakumar,K.|Ou,H.-Y.|Kadioglu,A.|O'Callaghan,C.|
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